Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 AP003071.4-201ENST00000562276 1284 ntBASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 AC120498.8-201ENST00000614275 531 ntBASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
ZC3H4Q9UPT8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 AC005363.2-201ENST00000618631 242 ntBASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H4Q9UPT8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H4Q9UPT8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 AC012676.1-201ENST00000574705 1949 ntBASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 CYP21A1P-202ENST00000354927 1481 ntBASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H4Q9UPT8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
ZC3H4Q9UPT8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H4Q9UPT8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 AC007322.3-201ENST00000426526 701 ntBASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
ZC3H4Q9UPT8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.18■■□□□ 1.62
ZC3H4Q9UPT8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 MIR6786-201ENST00000616843 113 ntBASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms