Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 AC007322.3-201ENST00000426526 701 ntBASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 AC011767.1-201ENST00000617410 1153 ntBASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 AC013268.1-206ENST00000638368 961 ntBASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 AC112229.1-201ENST00000639295 961 ntBASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PCDHGC3Q9UN70 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 AC027702.1-201ENST00000563810 1770 ntBASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC3Q9UN70 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 AC007225.1-201ENST00000566331 1836 ntBASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 AL162412.1-201ENST00000567129 965 ntBASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 BID-214ENST00000617586 542 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 AC092437.1-201ENST00000624794 1048 ntBASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC3Q9UN70 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGC3Q9UN70 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGC3Q9UN70 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGC3Q9UN70 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 CNN2P6-201ENST00000439038 900 ntBASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 CDV3P1-201ENST00000471403 739 ntBASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 AL591742.1-201ENST00000604433 565 ntBASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGC3Q9UN70 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGC3Q9UN70 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGC3Q9UN70 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms