Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.39■□□□□ 0.38
UBQLN2Q9UHD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.39■□□□□ 0.38
UBQLN2Q9UHD9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBQLN2Q9UHD9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UBQLN2Q9UHD9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.39■□□□□ 0.38
UBQLN2Q9UHD9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 HCG11-201ENST00000411553 5696 ntBASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
UBQLN2Q9UHD9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 KRT125P-201ENST00000546827 989 ntBASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 LTB4R2-202ENST00000528054 3092 ntBASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN2Q9UHD9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 AC104564.3-201ENST00000582367 638 ntBASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN2Q9UHD9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 AC006128.1-201ENST00000624704 1661 ntBASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN2Q9UHD9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN2Q9UHD9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms