Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC055733.4-201ENST00000638462 1354 ntBASIC19.7■□□□□ 0.74
NIPSNAP3AQ9UFN0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 UNC93B3-201ENST00000308076 687 ntBASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.69■□□□□ 0.74
NIPSNAP3AQ9UFN0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NIPSNAP3AQ9UFN0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC020907.5-201ENST00000624372 1936 ntBASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NIPSNAP3AQ9UFN0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC005224.4-201ENST00000583262 1652 ntBASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC105233.4-201ENST00000642045 216 ntBASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 FP700111.2-201ENST00000619190 1892 ntBASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NIPSNAP3AQ9UFN0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 AC024257.2-201ENST00000549699 147 ntBASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 AL136162.1-201ENST00000607711 1078 ntBASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.65■□□□□ 0.74
NIPSNAP3AQ9UFN0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NIPSNAP3AQ9UFN0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms