Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 AC133637.1-201ENST00000624115 1537 ntBASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 AL451085.2-201ENST00000605085 799 ntBASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 FP700111.2-201ENST00000619190 1892 ntBASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD3Q9UBI1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
COMMD3Q9UBI1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
COMMD3Q9UBI1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.14■□□□□ 0.5
COMMD3Q9UBI1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.14■□□□□ 0.5
COMMD3Q9UBI1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COMMD3Q9UBI1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 AC068587.7-201ENST00000641602 218 ntBASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD3Q9UBI1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD3Q9UBI1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 AP004607.7-201ENST00000527152 1677 ntBASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 AC004987.1-201ENST00000428627 508 ntBASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 Z92544.1-202ENST00000571933 1220 ntBASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 AC087239.1-201ENST00000622671 572 ntBASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms