Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AC116050.2-201ENST00000612102 1779 ntBASIC21.6■■□□□ 1.05
HCFC1R1Q9NWW0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1R1Q9NWW0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1R1Q9NWW0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
HCFC1R1Q9NWW0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
HCFC1R1Q9NWW0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 UBE2SP1-201ENST00000450587 669 ntBASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1R1Q9NWW0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 KRT17P3-201ENST00000420566 1262 ntBASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 FAM197Y4-202ENST00000622692 608 ntBASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HCFC1R1Q9NWW0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HCFC1R1Q9NWW0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HCFC1R1Q9NWW0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1R1Q9NWW0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 RN7SL471P-201ENST00000580476 299 ntBASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 AC242852.2-201ENST00000615738 1807 ntBASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1R1Q9NWW0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 AC069544.1-201ENST00000609399 999 ntBASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1R1Q9NWW0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1R1Q9NWW0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms