Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 AC013268.1-206ENST00000638368 961 ntBASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 AC112229.1-201ENST00000639295 961 ntBASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 RBM17P2-201ENST00000616397 1405 ntBASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PARPBPQ9NWS1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PARPBPQ9NWS1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.46■□□□□ 0.54
PARPBPQ9NWS1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PARPBPQ9NWS1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.46■□□□□ 0.54
PARPBPQ9NWS1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 AC007322.1-201ENST00000426983 750 ntBASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 DUX4L16-201ENST00000555130 1264 ntBASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PARPBPQ9NWS1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PARPBPQ9NWS1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 AC007322.4-201ENST00000509611 723 ntBASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 RARRES2P11-201ENST00000635158 484 ntBASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PARPBPQ9NWS1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms