Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 EEF1DP3-203ENST00000566025 782 ntBASIC21.61■■□□□ 1.05
CD248Q9HCU0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 OR7E47P-201ENST00000546390 1422 ntBASIC21.61■■□□□ 1.05
CD248Q9HCU0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.6■■□□□ 1.05
CD248Q9HCU0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.6■■□□□ 1.05
CD248Q9HCU0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.6■■□□□ 1.05
CD248Q9HCU0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CD248Q9HCU0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD248Q9HCU0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.59■■□□□ 1.05
CD248Q9HCU0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CD248Q9HCU0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.59■■□□□ 1.05
CD248Q9HCU0 AC010536.3-201ENST00000620306 533 ntBASIC21.59■■□□□ 1.05
CD248Q9HCU0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.59■■□□□ 1.05
CD248Q9HCU0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CD248Q9HCU0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD248Q9HCU0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CD248Q9HCU0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.58■■□□□ 1.05
CD248Q9HCU0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CD248Q9HCU0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.58■■□□□ 1.05
CD248Q9HCU0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.58■■□□□ 1.05
CD248Q9HCU0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD248Q9HCU0 AP006587.3-201ENST00000525742 1516 ntBASIC21.58■■□□□ 1.04
CD248Q9HCU0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD248Q9HCU0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD248Q9HCU0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD248Q9HCU0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD248Q9HCU0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 AL138781.1-201ENST00000566567 1274 ntBASIC21.57■■□□□ 1.04
CD248Q9HCU0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.57■■□□□ 1.04
CD248Q9HCU0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.57■■□□□ 1.04
CD248Q9HCU0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD248Q9HCU0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD248Q9HCU0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.56■■□□□ 1.04
CD248Q9HCU0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms