Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.06■□□□□ 0.96
SUDS3Q9H7L9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 EEF1DP3-203ENST00000566025 782 ntBASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUDS3Q9H7L9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUDS3Q9H7L9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 AC080038.1-201ENST00000611274 1154 ntBASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUDS3Q9H7L9 AL391422.3-201ENST00000603791 2761 ntBASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 AC053503.5-201ENST00000601508 636 ntBASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUDS3Q9H7L9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SUDS3Q9H7L9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SUDS3Q9H7L9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 AC006015.1-201ENST00000429970 570 ntBASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 AC011767.1-201ENST00000617410 1153 ntBASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 BID-214ENST00000617586 542 ntTSL 5 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms