Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 AC007225.1-201ENST00000566331 1836 ntBASIC26.04■■□□□ 1.76
CHMP4BQ9H444 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CHMP4BQ9H444 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHMP4BQ9H444 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 KRT18P61-201ENST00000585825 1298 ntBASIC26.02■■□□□ 1.76
CHMP4BQ9H444 AC087623.3-201ENST00000607047 1098 ntBASIC26.02■■□□□ 1.76
CHMP4BQ9H444 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 MYCNOS-205ENST00000641950 531 ntBASIC26.02■■□□□ 1.76
CHMP4BQ9H444 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHMP4BQ9H444 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHMP4BQ9H444 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 AC091799.1-201ENST00000422823 811 ntBASIC26■■□□□ 1.75
CHMP4BQ9H444 UBE2DNL-204ENST00000602536 740 ntBASIC26■■□□□ 1.75
CHMP4BQ9H444 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CHMP4BQ9H444 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHMP4BQ9H444 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CHMP4BQ9H444 AC027702.1-201ENST00000563810 1770 ntBASIC26■■□□□ 1.75
CHMP4BQ9H444 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 FEM1AP1-201ENST00000431297 1995 ntBASIC25.99■■□□□ 1.75
CHMP4BQ9H444 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.99■■□□□ 1.75
CHMP4BQ9H444 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CHMP4BQ9H444 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms