Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DUX4L5-201ENST00000630834 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC68Q9H2F9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC68Q9H2F9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC68Q9H2F9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC68Q9H2F9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 AC010141.2-201ENST00000452426 721 ntBASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 AC104187.1-201ENST00000607510 612 ntBASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 AC121338.2-201ENST00000622535 1744 ntBASIC20.64■□□□□ 0.89
CCDC68Q9H2F9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC68Q9H2F9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 KRT16P2-201ENST00000414673 1423 ntBASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 AC006128.1-201ENST00000624704 1661 ntBASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC68Q9H2F9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC68Q9H2F9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms