Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 AC027702.1-201ENST00000563810 1770 ntBASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 AC020907.5-201ENST00000624372 1936 ntBASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 AC133561.4-201ENST00000566112 224 ntBASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD4Q9H0A8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 IGHV3-19-201ENST00000521488 291 ntBASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 AC233992.3-201ENST00000607491 485 ntBASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD4Q9H0A8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 AC055733.4-201ENST00000638462 1354 ntBASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 MIR4767-201ENST00000582827 78 ntBASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COMMD4Q9H0A8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 AL136116.3-201ENST00000402907 1138 ntBASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
COMMD4Q9H0A8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms