Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 AL049796.1-201ENST00000565336 1766 ntBASIC16.71■□□□□ 0.27
NKX6-2Q9C056 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX6-2Q9C056 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NKX6-2Q9C056 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 AL032819.2-201ENST00000624543 2162 ntBASIC16.7■□□□□ 0.26
NKX6-2Q9C056 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-2Q9C056 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 AC120024.1-201ENST00000562672 995 ntBASIC16.69■□□□□ 0.26
NKX6-2Q9C056 CA15P2-201ENST00000611168 834 ntBASIC16.69■□□□□ 0.26
NKX6-2Q9C056 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-2Q9C056 AL049812.1-201ENST00000432563 2267 ntBASIC16.68■□□□□ 0.26
NKX6-2Q9C056 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 AC090340.1-201ENST00000620778 4980 ntBASIC16.68■□□□□ 0.26
NKX6-2Q9C056 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 KRT18P24-201ENST00000344739 1156 ntBASIC16.68■□□□□ 0.26
NKX6-2Q9C056 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-2Q9C056 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 AC093503.3-201ENST00000624917 2352 ntBASIC16.67■□□□□ 0.26
NKX6-2Q9C056 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NKX6-2Q9C056 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms