Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF1Q9BSM1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 POU5F1P4-201ENST00000413175 1085 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 HLA-L-209ENST00000420110 1011 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 CROCCP5-201ENST00000436658 830 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 DUX4L16-201ENST00000555130 1264 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 AC010536.3-201ENST00000620306 533 ntBASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.28■□□□□ 0.36
PCGF1Q9BSM1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.27■□□□□ 0.36
PCGF1Q9BSM1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
PCGF1Q9BSM1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.27■□□□□ 0.35
PCGF1Q9BSM1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCGF1Q9BSM1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCGF1Q9BSM1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 AC005181.1-201ENST00000604782 1256 ntBASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCGF1Q9BSM1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 AC061975.6-201ENST00000579045 1553 ntBASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms