Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PKP2Q99959 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP2Q99959 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP2Q99959 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PKP2Q99959 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP2Q99959 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP2Q99959 AP006587.3-201ENST00000525742 1516 ntBASIC19.42■□□□□ 0.7
PKP2Q99959 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP2Q99959 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PKP2Q99959 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.42■□□□□ 0.7
PKP2Q99959 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PKP2Q99959 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PKP2Q99959 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP2Q99959 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
PKP2Q99959 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PKP2Q99959 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PKP2Q99959 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.41■□□□□ 0.7
PKP2Q99959 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
PKP2Q99959 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PKP2Q99959 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.41■□□□□ 0.7
PKP2Q99959 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.41■□□□□ 0.7
PKP2Q99959 AC241377.3-202ENST00000626088 1088 ntBASIC19.41■□□□□ 0.7
PKP2Q99959 AC241585.3-202ENST00000628937 1088 ntBASIC19.41■□□□□ 0.7
PKP2Q99959 AC245100.8-202ENST00000629247 1058 ntBASIC19.41■□□□□ 0.7
PKP2Q99959 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
PKP2Q99959 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP2Q99959 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PKP2Q99959 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP2Q99959 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PKP2Q99959 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.4■□□□□ 0.7
PKP2Q99959 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.4■□□□□ 0.7
PKP2Q99959 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 AC092028.1-203ENST00000608262 953 ntBASIC19.4■□□□□ 0.7
PKP2Q99959 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PKP2Q99959 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
PKP2Q99959 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP2Q99959 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP2Q99959 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PKP2Q99959 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PKP2Q99959 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.39■□□□□ 0.69
PKP2Q99959 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.39■□□□□ 0.69
PKP2Q99959 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.39■□□□□ 0.69
PKP2Q99959 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP2Q99959 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PKP2Q99959 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
PKP2Q99959 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PKP2Q99959 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PKP2Q99959 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PKP2Q99959 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PKP2Q99959 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP2Q99959 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 OR2I1P-207ENST00000453522 948 ntBASIC19.38■□□□□ 0.69
PKP2Q99959 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.38■□□□□ 0.69
PKP2Q99959 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP2Q99959 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PKP2Q99959 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP2Q99959 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PKP2Q99959 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PKP2Q99959 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP2Q99959 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKP2Q99959 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms