Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXB1Q99853 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXB1Q99853 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FOXB1Q99853 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 AC116050.2-201ENST00000612102 1779 ntBASIC18.19■□□□□ 0.5
FOXB1Q99853 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FOXB1Q99853 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXB1Q99853 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXB1Q99853 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.19■□□□□ 0.5
FOXB1Q99853 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXB1Q99853 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXB1Q99853 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXB1Q99853 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXB1Q99853 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXB1Q99853 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXB1Q99853 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXB1Q99853 AC004911.1-201ENST00000416316 871 ntBASIC18.18■□□□□ 0.5
FOXB1Q99853 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXB1Q99853 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.18■□□□□ 0.5
FOXB1Q99853 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXB1Q99853 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXB1Q99853 DUX4L16-201ENST00000555130 1264 ntBASIC18.18■□□□□ 0.5
FOXB1Q99853 AC011484.1-201ENST00000377652 1995 ntBASIC18.18■□□□□ 0.5
FOXB1Q99853 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXB1Q99853 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXB1Q99853 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXB1Q99853 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXB1Q99853 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FOXB1Q99853 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXB1Q99853 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
FOXB1Q99853 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
FOXB1Q99853 CDV3P1-201ENST00000471403 739 ntBASIC18.17■□□□□ 0.5
FOXB1Q99853 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXB1Q99853 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXB1Q99853 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXB1Q99853 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXB1Q99853 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXB1Q99853 PLK5-205ENST00000642079 1969 ntBASIC18.17■□□□□ 0.5
FOXB1Q99853 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXB1Q99853 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.16■□□□□ 0.5
FOXB1Q99853 AC007322.4-201ENST00000509611 723 ntBASIC18.16■□□□□ 0.5
FOXB1Q99853 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
FOXB1Q99853 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
FOXB1Q99853 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXB1Q99853 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXB1Q99853 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
FOXB1Q99853 AC007322.3-201ENST00000426526 701 ntBASIC18.15■□□□□ 0.5
FOXB1Q99853 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 AL591742.1-201ENST00000604433 565 ntBASIC18.15■□□□□ 0.5
FOXB1Q99853 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXB1Q99853 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXB1Q99853 AC231657.2-201ENST00000624556 255 ntBASIC18.15■□□□□ 0.5
FOXB1Q99853 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXB1Q99853 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms