Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.78■■□□□ 1.08
SMOQ99835 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SMOQ99835 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMOQ99835 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMOQ99835 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
SMOQ99835 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.77■■□□□ 1.08
SMOQ99835 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMOQ99835 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMOQ99835 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMOQ99835 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMOQ99835 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
SMOQ99835 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.76■■□□□ 1.07
SMOQ99835 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.76■■□□□ 1.07
SMOQ99835 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.76■■□□□ 1.07
SMOQ99835 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.76■■□□□ 1.07
SMOQ99835 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 AC098934.4-201ENST00000564127 592 ntBASIC21.76■■□□□ 1.07
SMOQ99835 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.76■■□□□ 1.07
SMOQ99835 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMOQ99835 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
SMOQ99835 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMOQ99835 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMOQ99835 AL355472.2-201ENST00000422958 438 ntBASIC21.75■■□□□ 1.07
SMOQ99835 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.75■■□□□ 1.07
SMOQ99835 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.75■■□□□ 1.07
SMOQ99835 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
SMOQ99835 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMOQ99835 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.74■■□□□ 1.07
SMOQ99835 BX276092.2-201ENST00000417668 665 ntBASIC21.74■■□□□ 1.07
SMOQ99835 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.74■■□□□ 1.07
SMOQ99835 AC100791.3-201ENST00000617619 330 ntBASIC21.74■■□□□ 1.07
SMOQ99835 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMOQ99835 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
SMOQ99835 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.74■■□□□ 1.07
SMOQ99835 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMOQ99835 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.74■■□□□ 1.07
SMOQ99835 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.74■■□□□ 1.07
SMOQ99835 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.73■■□□□ 1.07
SMOQ99835 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.73■■□□□ 1.07
SMOQ99835 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMOQ99835 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMOQ99835 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMOQ99835 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMOQ99835 AC011484.1-201ENST00000377652 1995 ntBASIC21.72■■□□□ 1.07
SMOQ99835 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SMOQ99835 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.72■■□□□ 1.07
SMOQ99835 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.72■■□□□ 1.07
SMOQ99835 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMOQ99835 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.72■■□□□ 1.07
SMOQ99835 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMOQ99835 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
SMOQ99835 CYP21A1P-202ENST00000354927 1481 ntBASIC21.71■■□□□ 1.07
SMOQ99835 KRT17P1-201ENST00000399211 1546 ntBASIC21.71■■□□□ 1.07
SMOQ99835 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMOQ99835 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMOQ99835 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SMOQ99835 MCRIP2P1-201ENST00000394346 511 ntBASIC21.71■■□□□ 1.07
SMOQ99835 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMOQ99835 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms