Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
NPAS1Q99742 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NPAS1Q99742 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS1Q99742 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS1Q99742 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NPAS1Q99742 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.83■□□□□ 0.6
NPAS1Q99742 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS1Q99742 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
NPAS1Q99742 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS1Q99742 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
NPAS1Q99742 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS1Q99742 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 AC091799.1-201ENST00000422823 811 ntBASIC18.82■□□□□ 0.6
NPAS1Q99742 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS1Q99742 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.82■□□□□ 0.6
NPAS1Q99742 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
NPAS1Q99742 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.82■□□□□ 0.6
NPAS1Q99742 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NPAS1Q99742 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS1Q99742 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NPAS1Q99742 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.82■□□□□ 0.6
NPAS1Q99742 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS1Q99742 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NPAS1Q99742 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.81■□□□□ 0.6
NPAS1Q99742 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.81■□□□□ 0.6
NPAS1Q99742 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPAS1Q99742 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.81■□□□□ 0.6
NPAS1Q99742 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS1Q99742 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPAS1Q99742 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NPAS1Q99742 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS1Q99742 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NPAS1Q99742 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 AC245052.3-201ENST00000450182 901 ntBASIC18.8■□□□□ 0.6
NPAS1Q99742 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
NPAS1Q99742 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.8■□□□□ 0.6
NPAS1Q99742 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 AC243732.1-201ENST00000612648 864 ntBASIC18.8■□□□□ 0.6
NPAS1Q99742 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.8■□□□□ 0.6
NPAS1Q99742 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPAS1Q99742 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPAS1Q99742 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS1Q99742 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
NPAS1Q99742 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NPAS1Q99742 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.79■□□□□ 0.6
NPAS1Q99742 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.79■□□□□ 0.6
NPAS1Q99742 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NPAS1Q99742 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPAS1Q99742 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.79■□□□□ 0.6
NPAS1Q99742 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPAS1Q99742 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS1Q99742 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NPAS1Q99742 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NPAS1Q99742 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS1Q99742 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS1Q99742 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
NPAS1Q99742 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS1Q99742 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NPAS1Q99742 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS1Q99742 PLK5-205ENST00000642079 1969 ntBASIC18.78■□□□□ 0.6
NPAS1Q99742 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS1Q99742 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS1Q99742 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms