Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
S1PR3Q99500 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.01■□□□□ 0.31
S1PR3Q99500 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
S1PR3Q99500 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.01■□□□□ 0.31
S1PR3Q99500 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.01■□□□□ 0.31
S1PR3Q99500 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.01■□□□□ 0.31
S1PR3Q99500 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.01■□□□□ 0.31
S1PR3Q99500 AC120498.10-201ENST00000621827 505 ntBASIC17.01■□□□□ 0.31
S1PR3Q99500 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.01■□□□□ 0.31
S1PR3Q99500 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
S1PR3Q99500 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.01■□□□□ 0.31
S1PR3Q99500 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
S1PR3Q99500 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
S1PR3Q99500 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
S1PR3Q99500 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17■□□□□ 0.31
S1PR3Q99500 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
S1PR3Q99500 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
S1PR3Q99500 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17■□□□□ 0.31
S1PR3Q99500 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17■□□□□ 0.31
S1PR3Q99500 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17■□□□□ 0.31
S1PR3Q99500 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17■□□□□ 0.31
S1PR3Q99500 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17■□□□□ 0.31
S1PR3Q99500 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 AC006128.1-201ENST00000624704 1661 ntBASIC17■□□□□ 0.31
S1PR3Q99500 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 LINC01521-201ENST00000504184 1943 ntBASIC17■□□□□ 0.31
S1PR3Q99500 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17■□□□□ 0.31
S1PR3Q99500 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 AL157384.1-201ENST00000445995 2473 ntBASIC16.99■□□□□ 0.31
S1PR3Q99500 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
S1PR3Q99500 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.99■□□□□ 0.31
S1PR3Q99500 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 AC097381.1-201ENST00000429019 1296 ntBASIC16.99■□□□□ 0.31
S1PR3Q99500 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.99■□□□□ 0.31
S1PR3Q99500 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.99■□□□□ 0.31
S1PR3Q99500 MIR6821-201ENST00000617625 74 ntBASIC16.99■□□□□ 0.31
S1PR3Q99500 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
S1PR3Q99500 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
S1PR3Q99500 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
S1PR3Q99500 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
S1PR3Q99500 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.98■□□□□ 0.31
S1PR3Q99500 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 CCDC92B-201ENST00000575506 885 ntBASIC16.98■□□□□ 0.31
S1PR3Q99500 TERF1P2-201ENST00000583350 1212 ntBASIC16.98■□□□□ 0.31
S1PR3Q99500 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.98■□□□□ 0.31
S1PR3Q99500 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
S1PR3Q99500 AC121338.2-201ENST00000622535 1744 ntBASIC16.98■□□□□ 0.31
S1PR3Q99500 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
S1PR3Q99500 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
S1PR3Q99500 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
S1PR3Q99500 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
S1PR3Q99500 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
S1PR3Q99500 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.97■□□□□ 0.31
S1PR3Q99500 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
S1PR3Q99500 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
S1PR3Q99500 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms