Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 SAPCD2P4-201ENST00000424595 1171 ntBASIC34.8■■■■□ 3.16
IFT140Q96RY7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
IFT140Q96RY7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC34.8■■■■□ 3.16
IFT140Q96RY7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC34.79■■■■□ 3.16
IFT140Q96RY7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC34.79■■■■□ 3.16
IFT140Q96RY7 AC005363.2-201ENST00000618631 242 ntBASIC34.79■■■■□ 3.16
IFT140Q96RY7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
IFT140Q96RY7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC34.79■■■■□ 3.16
IFT140Q96RY7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
IFT140Q96RY7 KRT8P9-201ENST00000558927 1449 ntBASIC34.79■■■■□ 3.16
IFT140Q96RY7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
IFT140Q96RY7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC34.78■■■■□ 3.16
IFT140Q96RY7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC34.78■■■■□ 3.16
IFT140Q96RY7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
IFT140Q96RY7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
IFT140Q96RY7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC34.78■■■■□ 3.16
IFT140Q96RY7 AC087742.1-201ENST00000575880 1738 ntBASIC34.78■■■■□ 3.16
IFT140Q96RY7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
IFT140Q96RY7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC34.78■■■■□ 3.16
IFT140Q96RY7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC34.78■■■■□ 3.16
IFT140Q96RY7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC34.77■■■■□ 3.16
IFT140Q96RY7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
IFT140Q96RY7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC34.77■■■■□ 3.16
IFT140Q96RY7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
IFT140Q96RY7 AC087633.2-202ENST00000565166 1439 ntBASIC34.77■■■■□ 3.16
IFT140Q96RY7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
IFT140Q96RY7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.16
IFT140Q96RY7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
IFT140Q96RY7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC34.76■■■■□ 3.15
IFT140Q96RY7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC34.76■■■■□ 3.15
IFT140Q96RY7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC34.76■■■■□ 3.15
IFT140Q96RY7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC34.76■■■■□ 3.15
IFT140Q96RY7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
IFT140Q96RY7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.15
IFT140Q96RY7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
IFT140Q96RY7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
IFT140Q96RY7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
IFT140Q96RY7 KRT18P57-201ENST00000443599 1254 ntBASIC34.75■■■■□ 3.15
IFT140Q96RY7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC34.75■■■■□ 3.15
IFT140Q96RY7 AF186192.3-201ENST00000583427 947 ntBASIC34.75■■■■□ 3.15
IFT140Q96RY7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
IFT140Q96RY7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
IFT140Q96RY7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC34.75■■■■□ 3.15
IFT140Q96RY7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
IFT140Q96RY7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
IFT140Q96RY7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC34.74■■■■□ 3.15
IFT140Q96RY7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
IFT140Q96RY7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
IFT140Q96RY7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
IFT140Q96RY7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
IFT140Q96RY7 AC139530.1-201ENST00000575312 1977 ntBASIC34.73■■■■□ 3.15
IFT140Q96RY7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
IFT140Q96RY7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
IFT140Q96RY7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
IFT140Q96RY7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC34.73■■■■□ 3.15
IFT140Q96RY7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
IFT140Q96RY7 C11orf96-202ENST00000528572 1834 ntBASIC34.72■■■■□ 3.15
IFT140Q96RY7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
IFT140Q96RY7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC34.72■■■■□ 3.15
IFT140Q96RY7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC34.72■■■■□ 3.15
IFT140Q96RY7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC34.72■■■■□ 3.15
IFT140Q96RY7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
IFT140Q96RY7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
IFT140Q96RY7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
IFT140Q96RY7 TERF1P1-201ENST00000311003 1181 ntBASIC34.71■■■■□ 3.15
IFT140Q96RY7 AL355355.2-201ENST00000442321 338 ntBASIC34.71■■■■□ 3.15
IFT140Q96RY7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 RBM17P1-201ENST00000453646 1190 ntBASIC34.71■■■■□ 3.15
IFT140Q96RY7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
IFT140Q96RY7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 AC006557.6-201ENST00000623071 864 ntBASIC34.71■■■■□ 3.15
IFT140Q96RY7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
IFT140Q96RY7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC34.71■■■■□ 3.15
IFT140Q96RY7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
IFT140Q96RY7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 RER1-204ENST00000378518 522 ntTSL 3 BASIC34.71■■■■□ 3.15
IFT140Q96RY7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
IFT140Q96RY7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
IFT140Q96RY7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
IFT140Q96RY7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC34.7■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms