Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 AC034268.1-201ENST00000441047 882 ntBASIC19.55■□□□□ 0.72
BBS4Q96RK4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
BBS4Q96RK4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.55■□□□□ 0.72
BBS4Q96RK4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 AC097381.1-201ENST00000429019 1296 ntBASIC19.54■□□□□ 0.72
BBS4Q96RK4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 KRT18P20-201ENST00000548986 1279 ntBASIC19.54■□□□□ 0.72
BBS4Q96RK4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
BBS4Q96RK4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BBS4Q96RK4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
BBS4Q96RK4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BBS4Q96RK4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.52■□□□□ 0.72
BBS4Q96RK4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BBS4Q96RK4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
BBS4Q96RK4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BBS4Q96RK4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 MIR6821-201ENST00000617625 74 ntBASIC19.52■□□□□ 0.72
BBS4Q96RK4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.52■□□□□ 0.72
BBS4Q96RK4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BBS4Q96RK4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BBS4Q96RK4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
BBS4Q96RK4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BBS4Q96RK4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.51■□□□□ 0.71
BBS4Q96RK4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BBS4Q96RK4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms