Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NR1H4Q96RI1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 AC004687.1-201ENST00000579003 1625 ntBASIC19.44■□□□□ 0.7
NR1H4Q96RI1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NR1H4Q96RI1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 TCF3P1-201ENST00000423021 1937 ntBASIC19.43■□□□□ 0.7
NR1H4Q96RI1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 HCG11-201ENST00000411553 5696 ntBASIC19.43■□□□□ 0.7
NR1H4Q96RI1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 DUX4L4-201ENST00000566884 1269 ntBASIC19.43■□□□□ 0.7
NR1H4Q96RI1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NR1H4Q96RI1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
NR1H4Q96RI1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 AC093503.3-201ENST00000624917 2352 ntBASIC19.41■□□□□ 0.7
NR1H4Q96RI1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H4Q96RI1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms