Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP1S3Q96PC3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 AL499627.2-201ENST00000606283 725 ntBASIC15.57■□□□□ 0.08
AP1S3Q96PC3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP1S3Q96PC3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 AL033527.3-201ENST00000566366 1196 ntBASIC15.56■□□□□ 0.08
AP1S3Q96PC3 AC092028.1-203ENST00000608262 953 ntBASIC15.56■□□□□ 0.08
AP1S3Q96PC3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP1S3Q96PC3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 OR7E47P-201ENST00000546390 1422 ntBASIC15.55■□□□□ 0.08
AP1S3Q96PC3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.55■□□□□ 0.08
AP1S3Q96PC3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP1S3Q96PC3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms