Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMP6Q96FZ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CHMP6Q96FZ7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHMP6Q96FZ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP6Q96FZ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP6Q96FZ7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.77■□□□□ 0.91
CHMP6Q96FZ7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP6Q96FZ7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP6Q96FZ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 AIRN-201ENST00000601203 4374 ntBASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP6Q96FZ7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 GUSBP5-201ENST00000418136 578 ntBASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 AL034346.1-201ENST00000568244 1277 ntBASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP6Q96FZ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms