Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.78■□□□□ 0.92
SIPA1Q96FS4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.77■□□□□ 0.92
SIPA1Q96FS4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.77■□□□□ 0.92
SIPA1Q96FS4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SIPA1Q96FS4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIPA1Q96FS4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIPA1Q96FS4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.77■□□□□ 0.91
SIPA1Q96FS4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.76■□□□□ 0.91
SIPA1Q96FS4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 AC133561.1-201ENST00000568600 2415 ntBASIC20.75■□□□□ 0.91
SIPA1Q96FS4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.75■□□□□ 0.91
SIPA1Q96FS4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 PNMA6B-201ENST00000538162 1200 ntBASIC20.74■□□□□ 0.91
SIPA1Q96FS4 AC092368.3-202ENST00000574180 1591 ntBASIC20.74■□□□□ 0.91
SIPA1Q96FS4 AC008403.3-201ENST00000598924 454 ntBASIC20.74■□□□□ 0.91
SIPA1Q96FS4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIPA1Q96FS4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 GUSBP5-202ENST00000510805 1989 ntBASIC20.73■□□□□ 0.91
SIPA1Q96FS4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SIPA1Q96FS4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIPA1Q96FS4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms