Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 MIR3181-201ENST00000578512 73 ntBASIC19.48■□□□□ 0.71
NMD3Q96D46 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.48■□□□□ 0.71
NMD3Q96D46 pRNA.6-201ENST00000610482 90 ntBASIC19.48■□□□□ 0.71
NMD3Q96D46 pRNA.5-201ENST00000612139 90 ntBASIC19.48■□□□□ 0.71
NMD3Q96D46 pRNA.11-201ENST00000618423 90 ntBASIC19.48■□□□□ 0.71
NMD3Q96D46 pRNA.13-201ENST00000619112 90 ntBASIC19.48■□□□□ 0.71
NMD3Q96D46 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.48■□□□□ 0.71
NMD3Q96D46 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NMD3Q96D46 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NMD3Q96D46 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
NMD3Q96D46 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
NMD3Q96D46 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NMD3Q96D46 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 AC133637.1-201ENST00000624115 1537 ntBASIC19.47■□□□□ 0.71
NMD3Q96D46 AC004408.2-201ENST00000623613 2777 ntBASIC19.47■□□□□ 0.71
NMD3Q96D46 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.47■□□□□ 0.71
NMD3Q96D46 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NMD3Q96D46 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.47■□□□□ 0.71
NMD3Q96D46 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.46■□□□□ 0.71
NMD3Q96D46 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NMD3Q96D46 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.46■□□□□ 0.71
NMD3Q96D46 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.46■□□□□ 0.71
NMD3Q96D46 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.46■□□□□ 0.71
NMD3Q96D46 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.46■□□□□ 0.71
NMD3Q96D46 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.46■□□□□ 0.71
NMD3Q96D46 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NMD3Q96D46 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NMD3Q96D46 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NMD3Q96D46 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NMD3Q96D46 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.45■□□□□ 0.7
NMD3Q96D46 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.45■□□□□ 0.7
NMD3Q96D46 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NMD3Q96D46 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
NMD3Q96D46 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.45■□□□□ 0.7
NMD3Q96D46 CA15P2-201ENST00000611168 834 ntBASIC19.45■□□□□ 0.7
NMD3Q96D46 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NMD3Q96D46 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NMD3Q96D46 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NMD3Q96D46 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.44■□□□□ 0.7
NMD3Q96D46 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.44■□□□□ 0.7
NMD3Q96D46 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.44■□□□□ 0.7
NMD3Q96D46 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.44■□□□□ 0.7
NMD3Q96D46 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.44■□□□□ 0.7
NMD3Q96D46 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.44■□□□□ 0.7
NMD3Q96D46 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.44■□□□□ 0.7
NMD3Q96D46 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NMD3Q96D46 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NMD3Q96D46 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.43■□□□□ 0.7
NMD3Q96D46 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
NMD3Q96D46 AC092171.4-201ENST00000609130 632 ntBASIC19.43■□□□□ 0.7
NMD3Q96D46 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 AC112907.3-201ENST00000577781 2400 ntBASIC19.43■□□□□ 0.7
NMD3Q96D46 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms