Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.62■□□□□ 0.89
ULK4Q96C45 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.62■□□□□ 0.89
ULK4Q96C45 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.62■□□□□ 0.89
ULK4Q96C45 BID-214ENST00000617586 542 ntTSL 5 BASIC20.62■□□□□ 0.89
ULK4Q96C45 AC010536.3-201ENST00000620306 533 ntBASIC20.62■□□□□ 0.89
ULK4Q96C45 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ULK4Q96C45 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ULK4Q96C45 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ULK4Q96C45 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
ULK4Q96C45 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
ULK4Q96C45 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 MFSD11-216ENST00000590393 1141 ntBASIC20.61■□□□□ 0.89
ULK4Q96C45 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.61■□□□□ 0.89
ULK4Q96C45 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ULK4Q96C45 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ULK4Q96C45 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ULK4Q96C45 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
ULK4Q96C45 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.6■□□□□ 0.89
ULK4Q96C45 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.6■□□□□ 0.89
ULK4Q96C45 TERF1P5-201ENST00000477545 1207 ntBASIC20.6■□□□□ 0.89
ULK4Q96C45 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
ULK4Q96C45 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.6■□□□□ 0.89
ULK4Q96C45 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ULK4Q96C45 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
ULK4Q96C45 AL137784.2-201ENST00000607332 1000 ntBASIC20.6■□□□□ 0.89
ULK4Q96C45 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ULK4Q96C45 AC005229.4-201ENST00000610085 2198 ntBASIC20.6■□□□□ 0.89
ULK4Q96C45 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ULK4Q96C45 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.6■□□□□ 0.89
ULK4Q96C45 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.59■□□□□ 0.89
ULK4Q96C45 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.59■□□□□ 0.89
ULK4Q96C45 AC011767.1-201ENST00000617410 1153 ntBASIC20.59■□□□□ 0.89
ULK4Q96C45 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ULK4Q96C45 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.58■□□□□ 0.89
ULK4Q96C45 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ULK4Q96C45 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ULK4Q96C45 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ULK4Q96C45 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.58■□□□□ 0.89
ULK4Q96C45 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.58■□□□□ 0.88
ULK4Q96C45 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ULK4Q96C45 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.58■□□□□ 0.88
ULK4Q96C45 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ULK4Q96C45 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.57■□□□□ 0.88
ULK4Q96C45 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ULK4Q96C45 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.57■□□□□ 0.88
ULK4Q96C45 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.57■□□□□ 0.88
ULK4Q96C45 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ULK4Q96C45 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ULK4Q96C45 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
ULK4Q96C45 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ULK4Q96C45 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.57■□□□□ 0.88
ULK4Q96C45 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.57■□□□□ 0.88
ULK4Q96C45 AC013268.1-206ENST00000638368 961 ntBASIC20.57■□□□□ 0.88
ULK4Q96C45 AC112229.1-201ENST00000639295 961 ntBASIC20.57■□□□□ 0.88
ULK4Q96C45 AF106564.1-201ENST00000607058 2553 ntBASIC20.57■□□□□ 0.88
ULK4Q96C45 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ULK4Q96C45 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.57■□□□□ 0.88
ULK4Q96C45 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms