Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AC133552.2-202ENST00000575694 574 ntBASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AL050303.2-201ENST00000619798 666 ntBASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AL024507.2-201ENST00000606070 2574 ntBASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 SLC29A4P1-201ENST00000398760 971 ntBASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3KBP1Q96B97 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 AL355802.2-201ENST00000402069 882 ntBASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 AF201337.1-201ENST00000520239 748 ntBASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SH3KBP1Q96B97 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 TSPY6P-201ENST00000448518 926 ntBASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 AC008694.1-202ENST00000636953 945 ntBASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SH3KBP1Q96B97 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SH3KBP1Q96B97 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 AC243732.1-201ENST00000612648 864 ntBASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3KBP1Q96B97 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms