Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATP6V0A1Q93050 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP6V0A1Q93050 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 AC007322.3-201ENST00000426526 701 ntBASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP6V0A1Q93050 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V0A1Q93050 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 PRORSD1P-201ENST00000295112 541 ntBASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 LSM12P1-201ENST00000411836 588 ntBASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 AC079834.2-201ENST00000609776 1949 ntBASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V0A1Q93050 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP6V0A1Q93050 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
ATP6V0A1Q93050 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
ATP6V0A1Q93050 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP6V0A1Q93050 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 ESRRAP1-201ENST00000400596 1257 ntBASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 AC116050.2-201ENST00000612102 1779 ntBASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V0A1Q93050 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms