Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.54■■□□□ 1.36
USP6NLQ92738 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
USP6NLQ92738 MTDHP1-201ENST00000605323 784 ntBASIC23.54■■□□□ 1.36
USP6NLQ92738 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.54■■□□□ 1.36
USP6NLQ92738 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.54■■□□□ 1.36
USP6NLQ92738 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.53■■□□□ 1.36
USP6NLQ92738 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.53■■□□□ 1.36
USP6NLQ92738 RPS2P55-201ENST00000397318 883 ntBASIC23.53■■□□□ 1.36
USP6NLQ92738 MIR1224-201ENST00000408193 85 ntBASIC23.53■■□□□ 1.36
USP6NLQ92738 AC107956.1-201ENST00000494359 873 ntBASIC23.53■■□□□ 1.36
USP6NLQ92738 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.53■■□□□ 1.36
USP6NLQ92738 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
USP6NLQ92738 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.53■■□□□ 1.36
USP6NLQ92738 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
USP6NLQ92738 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.53■■□□□ 1.36
USP6NLQ92738 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
USP6NLQ92738 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
USP6NLQ92738 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.52■■□□□ 1.36
USP6NLQ92738 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
USP6NLQ92738 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
USP6NLQ92738 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.52■■□□□ 1.36
USP6NLQ92738 BX088651.1-201ENST00000540551 451 ntBASIC23.52■■□□□ 1.36
USP6NLQ92738 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.52■■□□□ 1.36
USP6NLQ92738 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
USP6NLQ92738 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
USP6NLQ92738 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.51■■□□□ 1.35
USP6NLQ92738 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.51■■□□□ 1.35
USP6NLQ92738 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.51■■□□□ 1.35
USP6NLQ92738 AC133681.1-201ENST00000465482 601 ntBASIC23.51■■□□□ 1.35
USP6NLQ92738 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.51■■□□□ 1.35
USP6NLQ92738 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.51■■□□□ 1.35
USP6NLQ92738 LINC01023-201ENST00000606054 436 ntBASIC23.51■■□□□ 1.35
USP6NLQ92738 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP6NLQ92738 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
USP6NLQ92738 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
USP6NLQ92738 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 C2orf69P4-201ENST00000565394 541 ntBASIC23.5■■□□□ 1.35
USP6NLQ92738 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.5■■□□□ 1.35
USP6NLQ92738 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
USP6NLQ92738 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP6NLQ92738 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
USP6NLQ92738 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
USP6NLQ92738 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
USP6NLQ92738 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.49■■□□□ 1.35
USP6NLQ92738 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 AC124016.1-201ENST00000609552 612 ntBASIC23.49■■□□□ 1.35
USP6NLQ92738 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.49■■□□□ 1.35
USP6NLQ92738 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
USP6NLQ92738 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.49■■□□□ 1.35
USP6NLQ92738 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
USP6NLQ92738 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.49■■□□□ 1.35
USP6NLQ92738 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USP6NLQ92738 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms