Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RTF1Q92541 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 MIR4651-201ENST00000582622 73 ntBASIC27.04■■□□□ 1.92
RTF1Q92541 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RTF1Q92541 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTF1Q92541 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTF1Q92541 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC27.04■■□□□ 1.92
RTF1Q92541 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
RTF1Q92541 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTF1Q92541 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RTF1Q92541 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
RTF1Q92541 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC27.03■■□□□ 1.92
RTF1Q92541 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.03■■□□□ 1.92
RTF1Q92541 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.03■■□□□ 1.92
RTF1Q92541 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
RTF1Q92541 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.03■■□□□ 1.92
RTF1Q92541 AL589743.5-201ENST00000616611 1050 ntBASIC27.03■■□□□ 1.92
RTF1Q92541 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTF1Q92541 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.02■■□□□ 1.92
RTF1Q92541 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.02■■□□□ 1.92
RTF1Q92541 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
RTF1Q92541 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
RTF1Q92541 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.02■■□□□ 1.92
RTF1Q92541 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.02■■□□□ 1.92
RTF1Q92541 KRT18P68-201ENST00000392293 1000 ntBASIC27.02■■□□□ 1.92
RTF1Q92541 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RTF1Q92541 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTF1Q92541 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RTF1Q92541 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 CYP21A1P-202ENST00000354927 1481 ntBASIC27.01■■□□□ 1.91
RTF1Q92541 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.01■■□□□ 1.91
RTF1Q92541 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTF1Q92541 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.01■■□□□ 1.91
RTF1Q92541 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27■■□□□ 1.91
RTF1Q92541 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC27■■□□□ 1.91
RTF1Q92541 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27■■□□□ 1.91
RTF1Q92541 Z98882.1-201ENST00000622160 2253 ntBASIC27■■□□□ 1.91
RTF1Q92541 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27■■□□□ 1.91
RTF1Q92541 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27■■□□□ 1.91
RTF1Q92541 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27■■□□□ 1.91
RTF1Q92541 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27■■□□□ 1.91
RTF1Q92541 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27■■□□□ 1.91
RTF1Q92541 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTF1Q92541 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27■■□□□ 1.91
RTF1Q92541 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27■■□□□ 1.91
RTF1Q92541 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTF1Q92541 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.99■■□□□ 1.91
RTF1Q92541 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTF1Q92541 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.99■■□□□ 1.91
RTF1Q92541 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.99■■□□□ 1.91
RTF1Q92541 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.99■■□□□ 1.91
RTF1Q92541 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.99■■□□□ 1.91
RTF1Q92541 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.99■■□□□ 1.91
RTF1Q92541 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTF1Q92541 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.99■■□□□ 1.91
RTF1Q92541 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.99■■□□□ 1.91
RTF1Q92541 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTF1Q92541 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTF1Q92541 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.99■■□□□ 1.91
RTF1Q92541 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
RTF1Q92541 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RTF1Q92541 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RTF1Q92541 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.98■■□□□ 1.91
RTF1Q92541 FAM201B-201ENST00000458407 597 ntBASIC26.98■■□□□ 1.91
RTF1Q92541 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RTF1Q92541 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTF1Q92541 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTF1Q92541 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms