Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SCG3Q8WXD2 AL391422.3-201ENST00000603791 2761 ntBASIC21.09■□□□□ 0.97
SCG3Q8WXD2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 FEM1AP4-201ENST00000443167 1987 ntBASIC21.09■□□□□ 0.97
SCG3Q8WXD2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCG3Q8WXD2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.08■□□□□ 0.97
SCG3Q8WXD2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCG3Q8WXD2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 AC026185.1-201ENST00000445748 174 ntBASIC21.07■□□□□ 0.96
SCG3Q8WXD2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 AC073111.5-205ENST00000641717 521 ntBASIC21.07■□□□□ 0.96
SCG3Q8WXD2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCG3Q8WXD2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 AC007952.6-201ENST00000573168 2673 ntBASIC21.06■□□□□ 0.96
SCG3Q8WXD2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 AC003957.1-201ENST00000625108 2673 ntBASIC21.06■□□□□ 0.96
SCG3Q8WXD2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCG3Q8WXD2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 CDCA4P2-201ENST00000441182 718 ntBASIC21.05■□□□□ 0.96
SCG3Q8WXD2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.05■□□□□ 0.96
SCG3Q8WXD2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms