Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CKAP2Q8WWK9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
CKAP2Q8WWK9 BX005040.4-201ENST00000637145 1518 ntBASIC20.52■□□□□ 0.87
CKAP2Q8WWK9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CKAP2Q8WWK9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CKAP2Q8WWK9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CKAP2Q8WWK9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CKAP2Q8WWK9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 AL158211.5-201ENST00000623583 2518 ntBASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKAP2Q8WWK9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 AP000974.1-201ENST00000623909 2387 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 AC011484.1-201ENST00000377652 1995 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 TSPY9P-201ENST00000440215 945 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 TSPY11P-201ENST00000442607 1045 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 MIR6724-1-201ENST00000616420 92 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 MIR6724-2-201ENST00000616483 92 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 MIR6724-4-201ENST00000617390 92 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 MIR6724-3-201ENST00000622482 92 ntBASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CKAP2Q8WWK9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CKAP2Q8WWK9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms