Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH19Q8TAB3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 FEM1AP1-201ENST00000431297 1995 ntBASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 UBE2DNL-204ENST00000602536 740 ntBASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDH19Q8TAB3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 RBM17P2-201ENST00000616397 1405 ntBASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
PCDH19Q8TAB3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 AC007225.1-201ENST00000566331 1836 ntBASIC21.34■■□□□ 1.01
PCDH19Q8TAB3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH19Q8TAB3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH19Q8TAB3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH19Q8TAB3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PCDH19Q8TAB3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.33■■□□□ 1
PCDH19Q8TAB3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH19Q8TAB3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PCDH19Q8TAB3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.33■■□□□ 1
PCDH19Q8TAB3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH19Q8TAB3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH19Q8TAB3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 PKD1P6-201ENST00000343738 4769 ntBASIC21.32■■□□□ 1
PCDH19Q8TAB3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 AC243732.1-201ENST00000612648 864 ntBASIC21.32■■□□□ 1
PCDH19Q8TAB3 LINC01006-201ENST00000333319 2292 ntBASIC21.32■■□□□ 1
PCDH19Q8TAB3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDH19Q8TAB3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.32■■□□□ 1
PCDH19Q8TAB3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms