Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 GABARAPL3-202ENST00000624044 1851 ntBASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM116Q8NCL8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 AP005212.1-201ENST00000581547 1997 ntBASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM116Q8NCL8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM116Q8NCL8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 AC053503.5-201ENST00000601508 636 ntBASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TMEM116Q8NCL8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM116Q8NCL8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms