Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USP38Q8NB14 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.09■■□□□ 1.29
USP38Q8NB14 AC093787.1-201ENST00000450396 207 ntBASIC23.09■■□□□ 1.29
USP38Q8NB14 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.09■■□□□ 1.29
USP38Q8NB14 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
USP38Q8NB14 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.09■■□□□ 1.29
USP38Q8NB14 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USP38Q8NB14 AC026310.3-201ENST00000625186 2373 ntBASIC23.09■■□□□ 1.29
USP38Q8NB14 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USP38Q8NB14 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.09■■□□□ 1.29
USP38Q8NB14 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
USP38Q8NB14 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USP38Q8NB14 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP38Q8NB14 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.08■■□□□ 1.29
USP38Q8NB14 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
USP38Q8NB14 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
USP38Q8NB14 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.08■■□□□ 1.29
USP38Q8NB14 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.08■■□□□ 1.29
USP38Q8NB14 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.08■■□□□ 1.29
USP38Q8NB14 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.08■■□□□ 1.29
USP38Q8NB14 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.08■■□□□ 1.29
USP38Q8NB14 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.08■■□□□ 1.29
USP38Q8NB14 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.08■■□□□ 1.29
USP38Q8NB14 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
USP38Q8NB14 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.08■■□□□ 1.29
USP38Q8NB14 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
USP38Q8NB14 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
USP38Q8NB14 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
USP38Q8NB14 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
USP38Q8NB14 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.07■■□□□ 1.28
USP38Q8NB14 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.07■■□□□ 1.28
USP38Q8NB14 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.07■■□□□ 1.28
USP38Q8NB14 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.07■■□□□ 1.28
USP38Q8NB14 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
USP38Q8NB14 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.07■■□□□ 1.28
USP38Q8NB14 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.07■■□□□ 1.28
USP38Q8NB14 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.07■■□□□ 1.28
USP38Q8NB14 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP38Q8NB14 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.06■■□□□ 1.28
USP38Q8NB14 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
USP38Q8NB14 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.06■■□□□ 1.28
USP38Q8NB14 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.06■■□□□ 1.28
USP38Q8NB14 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.06■■□□□ 1.28
USP38Q8NB14 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.06■■□□□ 1.28
USP38Q8NB14 AC003102.1-202ENST00000563394 1796 ntBASIC23.06■■□□□ 1.28
USP38Q8NB14 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.06■■□□□ 1.28
USP38Q8NB14 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP38Q8NB14 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
USP38Q8NB14 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
USP38Q8NB14 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 BX276092.2-201ENST00000417668 665 ntBASIC23.05■■□□□ 1.28
USP38Q8NB14 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.05■■□□□ 1.28
USP38Q8NB14 KRT18P21-201ENST00000515767 1272 ntBASIC23.05■■□□□ 1.28
USP38Q8NB14 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.05■■□□□ 1.28
USP38Q8NB14 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.05■■□□□ 1.28
USP38Q8NB14 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.05■■□□□ 1.28
USP38Q8NB14 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.05■■□□□ 1.28
USP38Q8NB14 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP38Q8NB14 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP38Q8NB14 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.04■■□□□ 1.28
USP38Q8NB14 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.04■■□□□ 1.28
USP38Q8NB14 AC010542.4-201ENST00000563151 1910 ntBASIC23.04■■□□□ 1.28
USP38Q8NB14 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.04■■□□□ 1.28
USP38Q8NB14 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.04■■□□□ 1.28
USP38Q8NB14 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP38Q8NB14 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.04■■□□□ 1.28
USP38Q8NB14 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms