Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIML1Q8N9V2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 AC105265.2-201ENST00000467189 838 ntBASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TRIML1Q8N9V2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
TRIML1Q8N9V2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIML1Q8N9V2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23■■□□□ 1.27
TRIML1Q8N9V2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23■■□□□ 1.27
TRIML1Q8N9V2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 AC079140.4-201ENST00000507448 529 ntBASIC23■■□□□ 1.27
TRIML1Q8N9V2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23■■□□□ 1.27
TRIML1Q8N9V2 AC138907.5-202ENST00000569484 235 ntBASIC23■■□□□ 1.27
TRIML1Q8N9V2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23■■□□□ 1.27
TRIML1Q8N9V2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TRIML1Q8N9V2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIML1Q8N9V2 KRT16P2-201ENST00000414673 1423 ntBASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 MIR5787-201ENST00000611784 55 ntBASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 RARRES2P11-201ENST00000635158 484 ntBASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIML1Q8N9V2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.98■■□□□ 1.27
TRIML1Q8N9V2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 AL512408.1-201ENST00000569378 2000 ntBASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIML1Q8N9V2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIML1Q8N9V2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms