Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH20Q8N6Y1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 AC091799.1-201ENST00000422823 811 ntBASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 AC083906.2-201ENST00000511578 360 ntBASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 AC069236.1-201ENST00000604339 616 ntBASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 AL109923.1-201ENST00000618799 583 ntBASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH20Q8N6Y1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 AF201337.1-201ENST00000520239 748 ntBASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 OR10C1-204ENST00000622521 1039 ntBASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 AC008694.1-202ENST00000636953 945 ntBASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH20Q8N6Y1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH20Q8N6Y1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 AC105036.2-201ENST00000569468 176 ntBASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH20Q8N6Y1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH20Q8N6Y1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDH20Q8N6Y1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PCDH20Q8N6Y1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDH20Q8N6Y1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH20Q8N6Y1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 SLC25A24-204ENST00000569674 2357 ntBASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 TSPY6P-201ENST00000448518 926 ntBASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH20Q8N6Y1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 CDV3P1-201ENST00000471403 739 ntBASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms