Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 AC034268.1-201ENST00000441047 882 ntBASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 AC019069.1-201ENST00000610008 1333 ntBASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE9Q8IYJ1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 KRT19P1-201ENST00000405746 1186 ntBASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 AC245052.3-201ENST00000450182 901 ntBASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 NTF6G-201ENST00000591094 616 ntBASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE9Q8IYJ1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE9Q8IYJ1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 KRT18P20-201ENST00000548986 1279 ntBASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE9Q8IYJ1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE9Q8IYJ1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE9Q8IYJ1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms