Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS13CQ709C8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 AC008175.2-201ENST00000612840 297 ntBASIC17.37■□□□□ 0.37
VPS13CQ709C8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS13CQ709C8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS13CQ709C8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 AC124016.1-201ENST00000609552 612 ntBASIC17.36■□□□□ 0.37
VPS13CQ709C8 MIR6786-201ENST00000616843 113 ntBASIC17.36■□□□□ 0.37
VPS13CQ709C8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS13CQ709C8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS13CQ709C8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS13CQ709C8 AC243732.1-201ENST00000612648 864 ntBASIC17.35■□□□□ 0.37
VPS13CQ709C8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS13CQ709C8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS13CQ709C8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS13CQ709C8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13CQ709C8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
VPS13CQ709C8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS13CQ709C8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.33■□□□□ 0.37
VPS13CQ709C8 AC120498.10-201ENST00000621827 505 ntBASIC17.33■□□□□ 0.37
VPS13CQ709C8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VPS13CQ709C8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13CQ709C8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS13CQ709C8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
VPS13CQ709C8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13CQ709C8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms