Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL4Q6ZR62 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.33■□□□□ 0.69
RTL4Q6ZR62 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL4Q6ZR62 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL4Q6ZR62 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL4Q6ZR62 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL4Q6ZR62 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 AC007322.1-201ENST00000426983 750 ntBASIC19.32■□□□□ 0.68
RTL4Q6ZR62 AC006970.2-201ENST00000450065 779 ntBASIC19.32■□□□□ 0.68
RTL4Q6ZR62 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 KRT16P2-201ENST00000414673 1423 ntBASIC19.32■□□□□ 0.68
RTL4Q6ZR62 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL4Q6ZR62 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTL4Q6ZR62 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
RTL4Q6ZR62 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL4Q6ZR62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 ID1-201ENST00000376105 1233 ntBASIC19.29■□□□□ 0.68
RTL4Q6ZR62 MIR663A-201ENST00000385250 93 ntBASIC19.29■□□□□ 0.68
RTL4Q6ZR62 CROCCP5-201ENST00000436658 830 ntBASIC19.29■□□□□ 0.68
RTL4Q6ZR62 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 AC013268.1-206ENST00000638368 961 ntBASIC19.29■□□□□ 0.68
RTL4Q6ZR62 AC112229.1-201ENST00000639295 961 ntBASIC19.29■□□□□ 0.68
RTL4Q6ZR62 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL4Q6ZR62 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL4Q6ZR62 AC061975.6-201ENST00000579045 1553 ntBASIC19.28■□□□□ 0.68
RTL4Q6ZR62 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms