Protein–RNA interactions for Protein: Q6MZZ7

CAPN13, Calpain-13, humanhuman

Predicted RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13Q6MZZ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN13Q6MZZ7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN13Q6MZZ7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CAPN13Q6MZZ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN13Q6MZZ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.11■□□□□ 0.81
CAPN13Q6MZZ7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN13Q6MZZ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 AC121338.2-201ENST00000622535 1744 ntBASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN13Q6MZZ7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 AC016769.1-201ENST00000409132 1010 ntBASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 AC243732.1-201ENST00000612648 864 ntBASIC20.08■□□□□ 0.81
CAPN13Q6MZZ7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN13Q6MZZ7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN13Q6MZZ7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN13Q6MZZ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.08■□□□□ 0.8
CAPN13Q6MZZ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN13Q6MZZ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 AC022517.1-201ENST00000592429 346 ntBASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 RBM17P2-201ENST00000616397 1405 ntBASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN13Q6MZZ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CAPN13Q6MZZ7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN13Q6MZZ7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms