Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FAM27BQ5VT28 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AC016769.1-201ENST00000409132 1010 ntBASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AC006015.1-201ENST00000429970 570 ntBASIC18.1■□□□□ 0.49
FAM27BQ5VT28 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 TERF1P5-201ENST00000477545 1207 ntBASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 AC010536.3-201ENST00000620306 533 ntBASIC18.1■□□□□ 0.49
FAM27BQ5VT28 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM27BQ5VT28 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 MIR935-201ENST00000401179 91 ntBASIC18.09■□□□□ 0.49
FAM27BQ5VT28 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
FAM27BQ5VT28 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM27BQ5VT28 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FAM27BQ5VT28 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FAM27BQ5VT28 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FAM27BQ5VT28 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM27BQ5VT28 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 AC007225.1-201ENST00000566331 1836 ntBASIC18.07■□□□□ 0.48
FAM27BQ5VT28 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.07■□□□□ 0.48
FAM27BQ5VT28 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FAM27BQ5VT28 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms