Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RC3H1Q5TC82 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 AL023875.1-201ENST00000640777 796 ntBASIC26.32■■□□□ 1.8
RC3H1Q5TC82 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 AC127496.7-201ENST00000625110 1798 ntBASIC26.32■■□□□ 1.8
RC3H1Q5TC82 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.32■■□□□ 1.8
RC3H1Q5TC82 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H1Q5TC82 AL135905.2-201ENST00000584934 1404 ntBASIC26.31■■□□□ 1.8
RC3H1Q5TC82 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 AC080038.3-201ENST00000623346 1952 ntBASIC26.3■■□□□ 1.8
RC3H1Q5TC82 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 AC005829.2-201ENST00000571422 1056 ntBASIC26.3■■□□□ 1.8
RC3H1Q5TC82 AC110285.5-201ENST00000611501 352 ntBASIC26.3■■□□□ 1.8
RC3H1Q5TC82 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H1Q5TC82 AC087633.2-202ENST00000565166 1439 ntBASIC26.3■■□□□ 1.8
RC3H1Q5TC82 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H1Q5TC82 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H1Q5TC82 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 AC239809.2-201ENST00000415381 517 ntBASIC26.27■■□□□ 1.8
RC3H1Q5TC82 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H1Q5TC82 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms