Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 AC007322.1-201ENST00000426983 750 ntBASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 AC243732.1-201ENST00000612648 864 ntBASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 AC013268.1-206ENST00000638368 961 ntBASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 AC112229.1-201ENST00000639295 961 ntBASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDSS1Q5T2R2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 RARRES2P11-201ENST00000635158 484 ntBASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDSS1Q5T2R2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 AC026185.1-201ENST00000445748 174 ntBASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 DUX4L16-201ENST00000555130 1264 ntBASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 AC073111.5-205ENST00000641717 521 ntBASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDSS1Q5T2R2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.72■□□□□ 0.59
PDSS1Q5T2R2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 AIRN-201ENST00000601203 4374 ntBASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 AC007322.4-201ENST00000509611 723 ntBASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 RBM17P2-201ENST00000616397 1405 ntBASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDSS1Q5T2R2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDSS1Q5T2R2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms