Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MS4A13Q5J8X5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 AC142086.2-201ENST00000569753 217 ntBASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 AC007375.3-201ENST00000600936 2314 ntBASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 MKRN4P-201ENST00000444706 1521 ntBASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A13Q5J8X5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.33■■□□□ 1.01
MS4A13Q5J8X5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MS4A13Q5J8X5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 AC010980.2-201ENST00000587099 1412 ntBASIC21.32■■□□□ 1
MS4A13Q5J8X5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.32■■□□□ 1
MS4A13Q5J8X5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MS4A13Q5J8X5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.32■■□□□ 1
MS4A13Q5J8X5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 AL138781.1-201ENST00000566567 1274 ntBASIC21.32■■□□□ 1
MS4A13Q5J8X5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MS4A13Q5J8X5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.32■■□□□ 1
MS4A13Q5J8X5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.31■■□□□ 1
MS4A13Q5J8X5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.31■■□□□ 1
MS4A13Q5J8X5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A13Q5J8X5 MIPEPP3-201ENST00000412105 444 ntBASIC21.3■■□□□ 1
MS4A13Q5J8X5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
MS4A13Q5J8X5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.3■■□□□ 1
MS4A13Q5J8X5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
MS4A13Q5J8X5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A13Q5J8X5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.3■■□□□ 1
MS4A13Q5J8X5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A13Q5J8X5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A13Q5J8X5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.29■■□□□ 1
MS4A13Q5J8X5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 AC005229.4-201ENST00000610085 2198 ntBASIC21.29■■□□□ 1
MS4A13Q5J8X5 AC011484.1-201ENST00000377652 1995 ntBASIC21.29■■□□□ 1
MS4A13Q5J8X5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.29■■□□□ 1
MS4A13Q5J8X5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.29■■□□□ 1
MS4A13Q5J8X5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A13Q5J8X5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A13Q5J8X5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 AC100791.3-201ENST00000617619 330 ntBASIC21.28■■□□□ 1
MS4A13Q5J8X5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.28■■□□□ 1
MS4A13Q5J8X5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.28■■□□□ 1
MS4A13Q5J8X5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms