Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AL162377.1-201ENST00000618844 1793 ntBASIC19.84■□□□□ 0.77
PDCD4Q53EL6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 AC011484.1-201ENST00000377652 1995 ntBASIC19.84■□□□□ 0.77
PDCD4Q53EL6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
PDCD4Q53EL6 FP700111.2-201ENST00000619190 1892 ntBASIC19.84■□□□□ 0.77
PDCD4Q53EL6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 TSPY26P-201ENST00000476365 1326 ntBASIC19.83■□□□□ 0.77
PDCD4Q53EL6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 EEF1DP3-203ENST00000566025 782 ntBASIC19.83■□□□□ 0.77
PDCD4Q53EL6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 AC008764.7-201ENST00000593779 1081 ntBASIC19.83■□□□□ 0.77
PDCD4Q53EL6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.83■□□□□ 0.77
PDCD4Q53EL6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.83■□□□□ 0.76
PDCD4Q53EL6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 AC099791.1-201ENST00000416440 715 ntBASIC19.82■□□□□ 0.76
PDCD4Q53EL6 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.82■□□□□ 0.76
PDCD4Q53EL6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 AC053503.5-201ENST00000601508 636 ntBASIC19.82■□□□□ 0.76
PDCD4Q53EL6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDCD4Q53EL6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.81■□□□□ 0.76
PDCD4Q53EL6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 AP004607.4-201ENST00000530158 1459 ntBASIC19.8■□□□□ 0.76
PDCD4Q53EL6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
PDCD4Q53EL6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 AL512408.1-201ENST00000569378 2000 ntBASIC19.8■□□□□ 0.76
PDCD4Q53EL6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDCD4Q53EL6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
PDCD4Q53EL6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms