Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 AC116050.2-201ENST00000612102 1779 ntBASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN20Q4JDL3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 DUX4L16-201ENST00000555130 1264 ntBASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PTPN20Q4JDL3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN20Q4JDL3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN20Q4JDL3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 CNN2P6-201ENST00000439038 900 ntBASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 BID-214ENST00000617586 542 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN20Q4JDL3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 AC013268.1-206ENST00000638368 961 ntBASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 AC112229.1-201ENST00000639295 961 ntBASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PTPN20Q4JDL3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms