Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM60Q495X7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 AL135905.2-201ENST00000584934 1404 ntBASIC22.87■■□□□ 1.25
TRIM60Q495X7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.87■■□□□ 1.25
TRIM60Q495X7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM60Q495X7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 KRASP1-201ENST00000407852 552 ntBASIC22.86■■□□□ 1.25
TRIM60Q495X7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM60Q495X7 AC110285.5-201ENST00000611501 352 ntBASIC22.86■■□□□ 1.25
TRIM60Q495X7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.86■■□□□ 1.25
TRIM60Q495X7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM60Q495X7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM60Q495X7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.86■■□□□ 1.25
TRIM60Q495X7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.85■■□□□ 1.25
TRIM60Q495X7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TRIM60Q495X7 C2orf69P4-201ENST00000565394 541 ntBASIC22.85■■□□□ 1.25
TRIM60Q495X7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TRIM60Q495X7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM60Q495X7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM60Q495X7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.84■■□□□ 1.25
TRIM60Q495X7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
TRIM60Q495X7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM60Q495X7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 PRKY-204ENST00000533551 1019 ntBASIC22.83■■□□□ 1.25
TRIM60Q495X7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.83■■□□□ 1.25
TRIM60Q495X7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 AC120498.8-201ENST00000614275 531 ntBASIC22.83■■□□□ 1.25
TRIM60Q495X7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRIM60Q495X7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.83■■□□□ 1.24
TRIM60Q495X7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM60Q495X7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM60Q495X7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM60Q495X7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.83■■□□□ 1.24
TRIM60Q495X7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRIM60Q495X7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
TRIM60Q495X7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.82■■□□□ 1.24
TRIM60Q495X7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.82■■□□□ 1.24
TRIM60Q495X7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM60Q495X7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRIM60Q495X7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.82■■□□□ 1.24
TRIM60Q495X7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.81■■□□□ 1.24
TRIM60Q495X7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 TMPOP1-202ENST00000424642 1267 ntBASIC22.81■■□□□ 1.24
TRIM60Q495X7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms