Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RSPO4Q2I0M5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 AC104076.2-201ENST00000448912 469 ntBASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 LINC00526-201ENST00000581067 1875 ntBASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 ABCB10P4-201ENST00000566803 2184 ntBASIC20.17■□□□□ 0.82
RSPO4Q2I0M5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 LINC01960-201ENST00000563759 1884 ntBASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.16■□□□□ 0.82
RSPO4Q2I0M5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RSPO4Q2I0M5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
RSPO4Q2I0M5 AC073508.3-201ENST00000619697 1419 ntBASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 AC006557.6-201ENST00000623071 864 ntBASIC20.14■□□□□ 0.81
RSPO4Q2I0M5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RSPO4Q2I0M5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms